Vir Singh

Associate Professor
Vir Singh

Education

  • Postdoctoral Fellowship, HIV Pathogenesis, University of Rochester Medical Center, Rochester, NY
  • Postdoctoral Fellowship, Genomic Imprinting, Roswell Park Comprehensive Cancer Center, Buffalo, NY
  • PhD in Biotechnology, Savitribai Phule Pune University, India.

Courses Taught at ACPHS

  • Microbial Genetics (BIO 340)
  • Viral Pathogenesis (BIO 690)
  • Journal Club (BIO 660G)
  • PHAGE Discovery (BIO 145)

Research Interests

Dr. Singh has an extensive scientific background in studying molecular mechanisms associated with HIV infection and pathogenesis, genomic imprinting, molecular biology and mouse models of disease. Dr. Singh’s research interests include understanding the underlying molecular mechanisms involved in- i) HIV associated neurological disorder, ii) HIV latency, and iii) Viral infection induced developmental defects. Two of his lab’s major projects are listed below.

Project 1: HIV associated comorbidities (neurological disorders): Introduction of combined antiretroviral therapy (cART) has successfully impeded the development of acquired immunodeficiency syndrome (AIDS) and people infected with HIV are living near-normal life span. Unfortunately, various reasons, including cART toxicity and low, albeit persistent viral reservoirs, put these individuals at a higher risk of developing age associated secondary disorders such as cardiovascular disease, neurological disorder, kidney disease and cancer. Dr. Singh’s recent studies have established that HIV can disrupt Blood-Brain-Barrier (BBB) integrity by specifically downregulating Sonic hedgehog (Shh) signaling in brain. BBB disruption is the key event leading to onset of neuroinflammation fueled by the infiltration of HIV infected/activated immune cells in the brain tissue. Dr. Singh’s ongoing research is focused at acquiring a deeper understanding of the roles played by Shh signaling in regulating brain homeostasis, specifically in response to viral infection. This line of work presents potential opportunities to design adjunct therapeutic strategies to alleviate viral infection (e.g. HIV, HTLV, HSV, JC Virus, and Zika) induced neuropathogenesis.

Project 2:  Research towards HIV cure: eliminating viral reservoirs: The biggest obstacle in achieving cure for HIV is the latent viral reservoirs which are established very early following the infection. There is an inherent heterogeneity among HIV-1 latent reservoirs presumably due to multiple epigenetic mechanisms that drive viral latency, cellular longevity, and modulation of host immune responses. It is for this reason that most of the Latency Reversing Agents (LRAs), which worked wonderfully in vitro, were found to be inefficient at affecting viral reservoirs in vivo. Hence, it is important to identify common downstream targets, which can modulate multiple cellular processes in various cell types – long non-coding RNAs (lncRNAs) are among such effectors. Dr. Singh has initiated a novel line of investigation to study the establishment and maintenance of latency orchestrated by multiple partners, including a select class of noncoding RNAs and intrinsic factors of innate immune response that might be working synergistically to keep the integrated provirus in a repressed state. This investigation is supported by an NIH R15 award to Dr. Singh. Successful completion of this study will identify novel targets and pave the way towards HIV cure by ‘Shock and Kill” approach to eliminate latent reservoir.

Learn More About Dr. Singh

  • NIH R15 (AREA) Award (R15AI165295-01A1; 2022-2025; $495,000). Investigating RNA polymerase III driven mechanisms in regulating HIV latency. (Role: PI)
  • NIH Subaward (2021-2022) from The George Washington University ($96,957): Platelet-mediated Neuroinflammatory response to HIV. (Role: PI at ACPHS)
  • Pilot Award (2018-2019) from Center for AIDS Research at URMC ($30,000): Targeting Polymerase III transcribed long noncoding RNAs for reactivation of HIV latency. (Role: PI)
  • Micro grant (2016) from CFAR at URMC ($2500) to perform microarray: Identification of the long noncoding RNAs (lncRNAs) required for establishment and maintenance of HIV latency. (Role: PI)

  • Member of Travel Award Committee (2022-2025) American Society for Virology since Spring 2021
  • ACTG Network: Member on the Reservoir Remission and Cure Transformative Science Group (Cure TSG) Dec. 2022- present.
  • Editorial Board member for Scientific reports in the field of infectious disease from 2019.
  • President: American Society of Microbiology, Easter New York (ENYASM) branch, 2024-present.
  • Member of American Society for Microbiology since Fall 2020
  • Member of American Society for Virology since Spring 2021

  • Program Director: MS in Molecular Biosciences, Summer 2024-present.
  • Chair: College Admissions Committee (since Aug. 2022)
  • Chair: Institutional Animal Care and Use Committee (IACUC), 2025-2026.
  • Member: Institutional Animal Care and Use Committee (Fall 2019-present)
  • Member (Faculty Senate): 2023-present.
  • Faculty Advisor: more than 20 advisees to date (BS Microbiology students)
  • Research Mentor: more than 20 students with capstone and MS thesis projects.
  • Member: Early Career Investigator Award (ECITA) Committee for SNIP during 2015-2018
  • Member: Society on Neuro-Immune Pharmacology (SNIP) since 2013- present.

  • Thompson LJ, Genovese J, Hong Z, Singh MV, Singh VB. HIV-Associated Neurocognitive Disorder: A Look into Cellular and Molecular Pathology. Int J Mol Sci. 2024 Apr 25;25(9). doi: 10.3390/ijms25094697. Review. PubMed PMID: 38731913; PubMed Central PMCID: PMC11083163. *Corresponding Author
  • Meng B, Bleau A, Bombaywala RR, DeGraw AS, Deol MS, Dollard KE, Gentile N, Jebaraj J, Kayayan GN, Miranda BC, Momoh AE, Morales E, Nunes AC, Oropallo AM, Otterstedt SC, Pridell AT, Roberts JI, Ruiz GA, Sangasani D, Smith RD, Tarar M, Singh V, Jayachandran P. Complete genome sequences of Gordonia rubripertincta phages OtterstedtS21 and Patos. Microbiol Resour Announc. 2023 Oct 19;12(10):e0071823. doi: 10.1128/MRA.00718-23. Epub 2023 Sep 29. PubMed PMID: 37772859; PubMed Central PMCID: PMC10586170.
  • Imran Jamal, Anisha Paudel, Landon Thompson, Michel Abdelmalek, Irfan A. Khan, Vir B. Singh*. Sulforaphane prevents the reactivation of HIV-1 by suppressing NFĸB signaling. Journal of virus eradication, 2023, Aug.  9 ( 3). *Corresponding Author
  • Meera Singh, Md Nasir Uddin, Vir B Singh, Angelique N Peterson, Kyle D Murray, Yuchuan Zhuang, Alicia Tyrell, Lu Wang, Madalina E Tivarus, Jianhui Zhong, Xing Qiu, Giovanni Schifitto. Initiation of combined antiretroviral therapy confers suboptimal beneficial effects on neurovascular function in people with HIV. Frontiers in Neurology, Aug. 31; 14:1240300
  • Khan Irfan, Worrad Arthur, Singh Meera, Maggirwar Sanjay, Singh Vir*. Human Immunodeficiency Virus-1 exerts its neurotoxic effects by downregulating Sonic hedgehog signaling. Journal of Neurovirology. 2022 Feb 18. doi: 10.1007/s13365-022-01061-8. *Corresponding Author

  • Sutton K, Boodoo Z, Peres S, Covacevich Vidalle M, Thomson L, Butze C, Waterman E, Brinkman A, Singh V, Kalinski P, Schifitto G, Singh M. Platelet origin TGFβ and PGE2 are associated with functional deficits of monocyte derived dendritic cells in people living with HIV. AIDS 2024 The 25th International AIDS Conference, July 22-26, 2024, Munich, Germany.
  • Hong Z, Thompson L, Dang C, Katz D, Bosque A, Singh V*. RNA Polymerase III may regulate HIV-1 replication. American Society for Virology Conference, April 5, 2024, June 24-28, Columbus, Ohio. (Abstract accepted and ZH received Travel Award)
  • Thompson L, Hong Z, Dang C, Katz D, Bosque A, Singh V*. RNA Polymerase III may regulate HIV-1 replication. ACPHS Annual Symposium, April 5, 2024, Albany, NY. Oral presentation
  • Thompson L, Hong Z, Dang C, Katz D, Bosque A, Singh V*. RNA Polymerase III may regulate HIV-1 replication. ENYASM Trainee Symposium. March 29, 2024, Albany, NY. Oral presentation (Best talk award in people’s choice category to LT)
  • Thompson L, Hong Z, Jamal I, Dang C, Bosque A, Singh V*. Investigating the role of RNA Polymerase-III in regulating HIV-1 replication. AAPS-NERDG conference, March 22, 2024, Groton, CT. (Best poster award to ZH)